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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 89846 | FGD3 | ZFYVE5 | FYVE, RhoGEF and PH domain containing 3 | - | CV:GWASdb CV:PGCnp Expression GO_Annotation |
|
| 2625 | GATA3 | 高清R | HDRS | GATA binding protein 3 | 10p15 | CV:PGCnp DEG:Maycox_2009 DMG:Jaffe_2016 |
|
| 2674 | GFRA1 | GDNFR | GDNFRA | GFR-ALPHA-1 | RET1L | RETL1 | TRNR1 | GDNF family receptor alpha 1 | 10q26.11 | CV:GWASdb CV:PGCnp GO_Annotation PMID:cooccur |
|
| 27239 | GPR162 | A-2 | GRCA | G protein-coupled receptor 162 | 12p13 | DMG:Nishioka_2013 | CompositeSet Darnell FMRP targets |
| 2065 | ERBB3 | ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3 | erb-b2 receptor tyrosine kinase 3 | 12q13 | Association CV:PGCnp GO_Annotation GR_COR GR_Ng GR_WM Network PMID:cooccur |
|
| 23389 | MED13L | MRFACD | PROSIT240 | THRAP2 | TRAP240L | mediator complex subunit 13 like | 12q24.21 | CV:GWASdb CV:PGCnp Expression PMID:cooccur |
CompositeSet Darnell FMRP targets |
| 3169 | FOXA1 | HNF3A | TCF3A | forkhead box A1 | 14q21.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 2530 | FUT8 | - | fucosyltransferase 8 (alpha (1,6) fucosyltransferase) | 14q24.3 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation PMID:cooccur |
|
| 3705 | ITPK1 | ITRPK1 | inositol-tetrakisphosphate 1-kinase | 14q31 | CV:PGCnp DMG:Wockner_2014 |
|
| 51466 | EVL | RNB6 | Enah/Vasp-like | 14q32.2 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
CompositeSet |
| 22909 | FAN1 | KIAA1018 | KMIN | MTMR15 | hFAN1 | FANCD2/FANCI-associated nuclease 1 | 15q13.3 | CNV:YES CV:PGCnp PMID:cooccur |
|
| 55930 | MYO5C | - | myosin VC | 15q21 | CV:PGCnp DMG:Wockner_2014 |
|
| 771 | CA12 | CA-XII | CAXII | HsT18816 | T18816 | carbonic anhydrase XII | 15q22 | CV:PGCnp DMG:Wockner_2014 |
|
| 6642 | SNX1 | HsT17379 | VPS5 | sorting nexin 1 | 15q22.31 | CV:PGCnp | |
| 400451 | FAM174B | - | family with sequence similarity 174 member B | 15q26.1 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 5046 | PCSK6 | PACE4 | SPC4 | proprotein convertase subtilisin/kexin type 6 | 15q26.3 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 18 | ABAT | GABA-AT | GABAT | NPD009 | 4-aminobutyrate aminotransferase | 16p13.2 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
|
| 9727 | RAB11FIP3 | CART1 | Rab11-FIP3 | RAB11 family interacting protein 3 (class II) | 16p13.3 | CV:PGCnp | |
| 21 | ABCA3 | ABC-C | ABC3 | EST111653 | LBM180 | SMDP3 | ATP binding cassette subfamily A member 3 | 16p13.3 | CV:PGCnp DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets |
| 6720 | SREBF1 | SREBP-1c | SREBP1 | SREBP1a | bHLHd1 | sterol regulatory element binding transcription factor 1 | 17p11.2 | CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur |
|
| 5914 | RARA | NR1B1 | RAR | retinoic acid receptor alpha | 17q21 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 3487 | IGFBP4 | BP-4 | HT29-IGFBP | IBP4 | IGFBP-4 | insulin like growth factor binding protein 4 | 17q21.2 | CV:PGCnp PMID:cooccur |
|
| 10614 | HEXIM1 | CLP1 | EDG1 | HIS1 | MAQ1 | hexamethylene bis-acetamide inducible 1 | 17q21.31 | CV:PGCnp DMG:Jaffe_2016 |
|
| 146923 | RUNDC1 | - | RUN domain containing 1 | 17q21.31 | CV:PGCnp | Ascano FMRP targets |
| 9368 | SLC9A3R1 | EBP50 | NHERF | NHERF-1 | NHERF1 | NPHLOP2 | SLC9A3 regulator 1 | 17q25.1 | DMG:Wockner_2014 DNM:Fromer_2014 GO_Annotation Network |
ION BALANCE CompositeSet |
| 25800 | SLC39A6 | LIV-1 | ZIP6 | solute carrier family 39 member 6 | 18q12.2 | CV:PGCnp | |
| 596 | BCL2 | Bcl-2 | PPP1R50 | B-cell CLL/lymphoma 2 | 18q21.3 | CV:PGCnp DMG:Wockner_2014 GO_Annotation Network PMID:cooccur |
|
| 23327 | NEDD4L | NEDD4-2 | NEDD4.2 | RSP5 | hNEDD4-2 | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 18q21.31 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
G2Cdb.humanPSD G2Cdb.humanPSP |
| 23030 | KDM4B | JMJD2B | TDRD14B | lysine demethylase 4B | 19p13.3 | CV:PGCnp DMG:Wockner_2014 Expression |
CompositeSet Darnell FMRP targets Ascano FMRP targets Chromatin Remodeling Genes |
| 29903 | CCDC106 | HSU79303 | ZNF581 | coiled-coil domain containing 106 | 19q13.42 | CV:PGCnp | |
| 147798 | TMC4 | - | transmembrane channel like 4 | 19q13.42 | CV:PGCnp DMG:Jaffe_2016 |
|
| 10451 | VAV3 | - | vav guanine nucleotide exchange factor 3 | 1p13.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 2166 | FAAH | FAAH-1 | PSAB | fatty acid amide hydrolase | 1p35-p34 | CV:PGCnp GO_Annotation PMID:cooccur |
|
| 7802 | DNALI1 | P28 | dJ423B22.5 | hp28 | dynein axonemal light intermediate chain 1 | 1p35.1 | CV:PGCnp | |
| 9923 | ZBTB40 | ZNF923 | zinc finger and BTB domain containing 40 | 1p36 | CV:PGCnp DNM:Xu_2012 |
CompositeSet |
| 55793 | FAM63A | - | family with sequence similarity 63 member A | 1q21.3 | CV:PGCnp DMG:Wockner_2014 Expression GSMA_I GSMA_IIA |
|
| 5087 | PBX1 | - | pre-B-cell leukemia homeobox 1 | 1q23 | CV:PGCnp DMG:vanEijk_2014 DNM:Fromer_2014 PMID:cooccur |
CompositeSet |
| 5824 | PEX19 | D1S2223E | HK33 | PBD12A | PMP1 | PMPI | PXF | PXMP1 | peroxisomal biogenesis factor 19 | 1q23.2 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 GSMA_I GSMA_IIA PMID:cooccur |
|
| 126823 | KLHDC9 | KARCA1 | kelch domain containing 9 | 1q23.3 | DMG:Jaffe_2016 GSMA_IIA |
|
| 55733 | HHAT | MART2 | SKI1 | Skn | hedgehog acyltransferase | 1q32 | CV:GWAScat CV:GWASdb CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 51706 | CYB5R1 | B5R.1 | B5R1 | B5R2 | NQO3A2 | humb5R2 | cytochrome b5 reductase 1 | 1q32.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 55614 | KIF16B | C20orf23 | KISC20ORF | SNX23 | kinesin family member 16B | 20p11.23 | CV:PGCnp | |
| 84181 | CHD6 | CHD-6 | CHD5 | RIGB | chromodomain helicase DNA binding protein 6 | 20q12 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 11122 | PTPRT | RPTPrho | protein tyrosine phosphatase, receptor type T | 20q12-q13 | CV:PGCnp | CompositeSet Darnell FMRP targets |
| 55861 | DBNDD2 | C20orf35 | CK1BP | HSMNP1 | dysbindin (dystrobrevin binding protein 1) domain containing 2 | 20q13.12 | DEG:Sanders_2013 | |
| 51604 | PIGT | CGI-06 | MCAHS3 | NDAP | PNH2 | phosphatidylinositol glycan anchor biosynthesis class T | 20q13.12 | CV:PGCnp DMG:Jaffe_2016 |
|
| 57580 | PREX1 | P-REX1 | phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 | 20q13.13 | CV:PGCnp DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets |
| 7033 | TFF3 | ITF | P1B | TFI | trefoil factor 3 | 21q22.3 | CV:PGCnp PMID:cooccur |
|
| 7494 | XBP1 | TREB-5 | TREB5 | XBP-1 | XBP2 | X-box binding protein 1 | 22q12.1|22q12 | Association CV:PGCnp DEG:Sanders_2013 DMG:Jaffe_2016 GR_Ng GR_WM GSMA_I PMID:cooccur |
|
| 23541 | SEC14L2 | C22orf6 | SPF | TAP | TAP1 | SEC14 like lipid binding 2 | 22q12.2 | CV:PGCnp GSMA_I |
|
| 27124 | INPP5J | INPP5 | PIB5PA | PIPP | inositol polyphosphate-5-phosphatase J | 22q12.2 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 9145 | SYNGR1 | - | synaptogyrin 1 | 22q13.1 | Association CV:PGCnp GR_COR GR_WM PMID:cooccur |
EXOCYTOSIS G2Cdb.human_mGluR5 G2Cdb.humanNRC CompositeSet Darnell FMRP targets Potential synaptic genes |
| 9620 | CELSR1 | ADGRC1 | CDHF9 | FMI2 | HFMI2 | ME2 | cadherin EGF LAG seven-pass G-type receptor 1 | 22q13.3 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
Ascano FMRP targets |
| 7844 | RNF103 | HKF-1 | KF-1 | KF1 | ZFP-103 | ZFP103 | ring finger protein 103 | 2p11.2 | CV:PGCnp DEG:Zhao_2015 DMG:Nishioka_2013 GO_Annotation GSMA_I |
|
| 253782 | CERS6 | CERS5 | LASS6 | ceramide synthase 6 | 2q24.3 | CV:PGCnp GSMA_IIA |
|
| 2066 | ERBB4 | ALS19 | HER4 | p180erbB4 | erb-b2 receptor tyrosine kinase 4 | 2q33.3-q34 | Association Core CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation GR_COR GR_Ng GR_WM GSMA_IIA GSMA_IIE Network PMID:cooccur |
Potential synaptic genes |
| 3667 | IRS1 | HIRS-1 | insulin receptor substrate 1 | 2q36 | CV:PGCnp DMG:Jaffe_2016 DMG:Montano_2016 DMG:Wockner_2014 DNM:Xu_2012 GSMA_IIA GSMA_IIE Network PMID:cooccur |
G2Cdb.humanNRC G2Cdb.humanPSP CompositeSet Ascano FMRP targets |
| 26018 | LRIG1 | LIG-1 | LIG1 | leucine-rich repeats and immunoglobulin-like domains 1 | 3p14 | CV:PGCnp DMG:Nishioka_2013 |
Ascano FMRP targets |
| 3913 | LAMB2 | LAMS | NPHS5 | laminin subunit beta 2 | 3p21 | CV:PGCnp GO_Annotation |
|
| 54585 | LZTFL1 | BBS17 | leucine zipper transcription factor like 1 | 3p21.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 |
|
| 51161 | C3orf18 | G20 | chromosome 3 open reading frame 18 | 3p21.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
|
| 11180 | WDR6 | - | WD repeat domain 6 | 3p21.31 | CV:PGCnp DMG:vanEijk_2014 |
CompositeSet Darnell FMRP targets |
| 54681 | P4HTM | EGLN4 | HIFPH4 | P4H-TM | PH-4 | PH4 | PHD4 | prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) | 3p21.31|3p21.3 | CV:PGCnp DMG:Jaffe_2016 |
|
| 23171 | GPD1L | GPD1-L | glycerol-3-phosphate dehydrogenase 1-like | 3p22.3 | CV:PGCnp GSMA_I |
|
| 79885 | 高清AC11 | 高清11 | histone deacetylase 11 | 3p25.1 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 GSMA_I PMID:cooccur |
Chromatin Remodeling Genes |
| 8553 | BHLHE40 | BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14 | 基本helix-loop-helix e40家庭成员 | 3p26 | CV:PGCnp PMID:cooccur |
|
| 54502 | RBM47 | NET18 | RNA binding motif protein 47 | 4p14 | CV:PGCnp DEG:Sanders_2013 DMG:Wockner_2014 |
|
| 5860 | QDPR | DHPR | PKU2 | SDR33C1 | quinoid dihydropteridine reductase | 4p15.31 | CV:GWASdb CV:PGCnp |
RNA AND PROTEIN SYNTHESIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS |
| 23324 | MAN2B2 | - | mannosidase alpha class 2B member 2 | 4p16.1 | CV:PGCnp DMG:Jaffe_2016 DMG:vanEijk_2014 DNM:McCarthy_2014 |
|
| 3064 | HTT | 高清| IT15 | huntingtin | 4p16.3 | CV:PGCnp Network PMID:cooccur |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 4299 | AFF1 | AF4 | MLLT2 | PBM1 | AF4/FMR2 family member 1 | 4q21 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 DMG:Wockner_2014 |
|
| 375449 | MAST4 | - | microtubule associated serine/threonine kinase family member 4 | 5q12.3 | CV:GWASdb CV:PGCnp |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 9522 | SCAMP1 | SCAMP | SCAMP37 | secretory carrier membrane protein 1 | 5q14.1 | CV:PGCnp PMID:cooccur |
EXOCYTOSIS |
| 90355 | C5orf30 | - | chromosome 5 open reading frame 30 | 5q21.1 | CV:GWASdb CV:PGCnp |
|
| 7905 | REEP5 | C5orf18 | D5S346 | DP1 | TB2 | YOP1 | Yip2e | receptor accessory protein 5 | 5q22.2 | CV:PGCnp DMG:Jaffe_2016 Expression |
|
| 6500 | SKP1 | EMC19 | OCP-II | OCP2 | SKP1A | TCEB1L | p19A | S-phase kinase-associated protein 1 | 5q31 | DMG:Wockner_2014 Expression PMID:cooccur |
INTRACELLULAR SIGNAL TRANSDUCTION |
| 51523 | CXXC5 | CF5 | HSPC195 | RINF | WID | CXXC finger protein 5 | 5q31.2 | CV:PGCnp GSMA_I |
|
| 9812 | KIAA0141 | DELE | KIAA0141 | 5q31.3 | CV:PGCnp GSMA_I |
|
| 60481 | ELOVL5 | HELO1 | SCA38 | dJ483K16.1 | ELOVL fatty acid elongase 5 | 6p12.1 | CV:PGCnp DMG:Wockner_2014 GSMA_IIE PMID:cooccur |
|
| 114781 | BTBD9 | dJ322I12.1 | BTB domain containing 9 | 6p21 | CV:PGCnp DMG:Wockner_2014 GSMA_I GSMA_IIE PMID:cooccur |
|
| 720 | C4A | C4 | C4A2 | C4A3 | C4A4 | C4A6 | C4AD | C4S |CO4 | CPAMD2 | RG | complement component 4A (Rodgers blood group) | 6p21.3 | Association CV:PGCnp GSMA_I PMID:cooccur |
|
| 721 | C4B | C4B1 | C4B12 | C4B2 | C4B3 | C4B5 | C4BD | C4B_2 | C4F | CH | CO4 | CPAMD3 | complement component 4B (Chido blood group) | 6p21.3 | Association CV:PGCnp GR_Ng GR_WM GSMA_I PMID:cooccur |
|
| 25803 | SPDEF | PDEF | bA375E1.3 | SAM pointed domain containing ETS transcription factor | 6p21.3 | CV:PGCnp GSMA_I GSMA_IIE |
|
| 29116 | MYLIP | IDOL | MIR | myosin regulatory light chain interacting protein | 6p22.3 | CV:GWASdb CV:PGCnp GO_Annotation GSMA_I |
|
| 7162 | TPBG | 5T4 | 5T4AG | M6P1 | WAIF1 | trophoblast glycoprotein | 6q14-q15 | CV:PGCnp DMG:Wockner_2014 |
|
| 4602 | MYB | Cmyb | c-myb | c-myb_CDS | efg | MYB proto-oncogene, transcription factor | 6q22-q23 | CV:PGCnp PMID:cooccur |
|
| 2099 | ESR1 | ER | ESR | ESRA | ESTRR | Era | NR3A1 | estrogen receptor 1 | 6q25.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 Expression Network PMID:cooccur |
|
| 2737 | GLI3 | ACLS | GCPS | GLI3-190 | GLI3FL | PAP-A | PAPA | PAPA1 | PAPB | PHS | PPDIV | GLI family zinc finger 3 | 7p13 | CV:GWASdb CV:PGCnp DNM:Fromer_2014 GO_Annotation |
CompositeSet |
| 222171 | PRR15 | - | proline rich 15 | 7p14.3 | CV:GWASdb CV:PGCnp |
|
| 27075 | TSPAN13 | NET-6 | NET6 | TM4SF13 | tetraspanin 13 | 7p21.1 | CV:PGCnp DMG:Jaffe_2016 |
|
| 23303 | KIF13B | GAKIN | kinesin family member 13B | 8p12 | CV:PGCnp DNM:Fromer_2014 GSMA_IIA GSMA_IIE |
CompositeSet Ascano FMRP targets |
| 9 | NAT1 | AAC1 | MNAT | NAT-1 | NATI | N-acetyltransferase 1 (arylamine N-acetyltransferase) | 8p22 | CV:PGCnp GSMA_I GSMA_IIA GSMA_IIE PMID:cooccur |
|
| 55638 | SYBU | GOLSYN | OCSYN | SNPHL | syntabulin | 8q23.2 | CV:GWASdb CV:PGCnp Network |
INTRACELLULAR TRAFFICKING |
| 573 | BAG1 | BAG-1 | HAP | RAP46 | BCL2 associated athanogene 1 | 9p12 | CV:PGCnp Expression PMID:cooccur |
|
| 2203 | FBP1 | FBP | fructose-bisphosphatase 1 | 9q22.3 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 7357 | UGCG | GCS | GLCT1 | UDP-glucose ceramide glucosyltransferase | 9q31 | CV:PGCnp | |
| 9858 | PPP1R26 | KIAA0649 | protein phosphatase 1 regulatory subunit 26 | 9q34.3 | CV:PGCnp | |
| 56654 | NPDC1 | CAB | CAB- | CAB-1 | CAB1 | NPDC-1 | neural proliferation, differentiation and control, 1 | 9q34.3 | DMG:Montano_2016 PMID:cooccur |
|
| 138162 | C9orf116 | PIERCE1 | RbEST47 | chromosome 9 open reading frame 116 | 9q34.3 | CV:PGCnp | |