Search results: The pahtwayp4086has 38 genes in the original annotation. Currently, there are 34 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
55691 FRMD4A CCAFCA | FRMD4 | bA295P9.4 丰贸域包含4 10p13 CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
347731 LRRTM3 - leucine rich repeat transmembrane neuronal 3 10q21.3 CV:PGCnp
PMID:cooccur
50632 CALY DRD1IP | NSG3 calcyon neuron specific vesicular protein 10q26.3 ADT:Sun_2012
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
3739 KCNA4 HBK4 | HK1 | HPCN2 | HUKII | KCNA4L | KCNA8 | KV1.4 | PCN2 potassium voltage-gated channel subfamily A member 4 11p14 CV:PGCnp EXCITABILITY
55553 SOX6 HSSOX6 | SOXD SRY-box 6 11p15.3 CV:PGCnp
PMID:cooccur
219539 YPEL4 - yippee like 4 11q12.1 CV:PGCnp
DMG:Wockner_2014
4978 OPCML IGLON1 | OBCAM | OPCM opioid binding protein/cell adhesion molecule-like 11q25 Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
6857 SYT1 P65 | SVP65 | SYT synaptotagmin 1 12cen-q21 CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
784 CACNB3 CAB3 | CACNLB3 calcium voltage-gated channel auxiliary subunit beta 3 12q13 CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5801 PTPRR EC-PTP | PCPTP1 | PTP-SL | PTPBR7 | PTPRQ protein tyrosine phosphatase, receptor type R 12q15 CV:PGCnp
84101 USP44 - ubiquitin specific peptidase 44 12q22 CV:GWASdb
CV:PGCnp
CV:PheWAS
26278 SACS ARSACS | DNAJC29 | PPP1R138 | SPAX6 sacsin molecular chaperone 13q12 CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
57626 KLHL1 MRP2 kelch like family member 1 13q21 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
64881 PCDH20 PCDH13 protocadherin 20 13q21 CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
11151 CORO1A CLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57 coronin 1A 16p11.2 CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
3759 KCNJ2 ATFB9 | HHBIRK1 | HHIRK1 | IRK1 | KIR2.1 | LQT7 | SQT3 potassium voltage-gated channel subfamily J member 2 17q24.3 CV:PGCnp
DEG:Zhao_2015
Network
8715 NOL4 CT125 | HRIHFB2255 | NOLP nucleolar protein 4 18日12 CV:PGCnp
DMG:Jaffe_2016
2134 EXTL1 EXTL exostosin-like glycosyltransferase 1 1p36.1 CV:PGCnp
DNM:Fromer_2014
CompositeSet
388591 RNF207 C1orf188 ring finger protein 207 1p36.31 CV:PGCnp
57144 PAK7 PAK5 p21 protein (Cdc42/Rac)-activated kinase 7 20p12 CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2847 MCHR1 GPR24 | MCH-1R | MCH1R | SLC-1 | SLC1 melanin concentrating hormone receptor 1 22q13.2 Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
79924 ADM2 AM2 | dJ579N16.4 adrenomedullin 2 22q13.33 CV:PGCnp
4211 MEIS1 - Meis homeobox 1 2p14 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5746 PTH2R PTHR2 parathyroid hormone 2 receptor 2q33 CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
Network
130752 MDH1B RP11-95H11 malate dehydrogenase 1B 2q33.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
6092 ROBO2 SAX3 roundabout guidance receptor 2 3p12.3 CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
165679 SPTSSB ADMP | C3orf57 | SSSPTB serine palmitoyltransferase small subunit B 3q26.1 CV:PGCnp
5274 SERPINI1 PI12 | neuroserpin serpin peptidase inhibitor, clade I (neuroserpin), member 1 3q26.1 CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
4887 NPY2R NPY2-R neuropeptide Y receptor Y2 4q31 CV:PGCnp
PMID:cooccur
4886 NPY1R NPY1-R | NPYR neuropeptide Y receptor Y1 4q32.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5122 PCSK1 BMIQ12 | NEC1 | PC1 | PC3 | SPC3 proprotein convertase subtilisin/kexin type 1 5q15-q21 CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
389421 LIN28B CSDD2 lin-28 homolog B 6q21 CV:PGCnp
CV:PheWAS
3620 IDO1 IDO | IDO-1 | INDO indoleamine 2,3-dioxygenase 1 8p11.21 PMID:cooccur
6887 TAL2 - T-cell acute lymphocytic leukemia 2 9q32 CV:PGCnp


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