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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group? | Functional group? |
|---|---|---|---|---|---|---|
| 55691 | FRMD4A | CCAFCA | FRMD4 | bA295P9.4 | FERM domain containing 4A | 10p13 | CV:PGCnp CV:PheWAS DMG:Wockner_2014 |
|
| 2625 | GATA3 | HDR | HDRS | GATA binding protein 3 | 10p15 | CV:PGCnp DEG:Maycox_2009 DMG:Jaffe_2016 |
|
| 220963 | SLC16A9 | C10orf36 | MCT9 | solute carrier family 16 member 9 | 10q21.2 | CV:GWASdb CV:PGCnp CV:PheWAS |
|
| 627 | BDNF | ANON2 | BULN2 | brain-derived neurotrophic factor | 11p13 | Association CV:PGCnp DMG:Jaffe_2016 GO_Annotation GR_COR GR_Ng GR_WM PMID:cooccur |
NEUROTROPHIN SIGNALING Potential synaptic genes |
| 133 | ADM | AM | PAMP | adrenomedullin | 11p15.4 | DMG:Jaffe_2016 PMID:cooccur |
|
| 8642 | DCHS1 | CDH19 | CDH25 | CDHR6 | FIB1 | MVP2 | PCDH16 | VMLDS1 | dachsous cadherin-related 1 | 11p15.4 | CV:PGCnp | CELL ADHESION AND TRANSSYNAPTIC SIGNALING Ascano FMRP targets |
| 120114 | FAT3 | CDHF15 | CDHR10 | hFat3 | FAT atypical cadherin 3 | 11q14.3 | CV:PGCnp PMID:cooccur |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 6489 | ST8SIA1 | GD3S | SIAT8 | SIAT8-A | SIAT8A | ST8SiaI | ST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 1 | 12p12.1-p11.2 | CV:PGCnp Expression |
|
| 144165 | PRICKLE1 | EPM1B | RILP | prickle planar cell polarity protein 1 | 12q12 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 8739 | HRK | DP5 | HARAKIRI | harakiri, BCL2 interacting protein | 12q24.22 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur |
|
| 26524 | LATS2 | KPM | large tumor suppressor kinase 2 | 13q12.11 | DMG:Wockner_2014 | Ascano FMRP targets |
| 1910 | EDNRB | ABCDS | ET-B | ET-BR | ETB | ETB1 | ETBR | ETRB | HSCR | HSCR2 | WS4A | endothelin receptor type B | 13q22 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 5587 | PRKD1 | PKC-MU | PKCM | PKD | PRKCM | protein kinase D1 | 14q11 | CV:GWAScat CV:PGC128 CV:PGCnp GSMA_I |
|
| 4916 | NTRK3 | GP145-TrkC | TRKC | gp145(trkC) | neurotrophic tyrosine kinase, receptor, type 3 | 15q25 | CV:GWAScat CV:GWASdb CV:PGCnp GO_Annotation Network PMID:cooccur |
CompositeSet Darnell FMRP targets |
| 8128 | ST8SIA2 | HsT19690 | SIAT8B | ST8SIA-II | STX | ST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 2 | 15q26 | Association CV:PGCnp DMG:Wockner_2014 GO_Annotation GR_COR GR_WM PMID:cooccur |
|
| 7026 | NR2F2 | ARP1 | CHTD4 | COUPTFB | COUPTFII | NF-E3 | NR2F1 | SVP40 | TFCOUP2 | nuclear receptor subfamily 2 group F member 2 | 15q26 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation |
|
| 83719 | YPEL3 | - | yippee like 3 | 16p11.2 | CNV:YES CV:PGCnp DMG:Wockner_2014 GSMA_IIE |
|
| 23090 | ZNF423 | Ebfaz | JBTS19 | NPHP14 | OAZ | Roaz | ZFP423 | Zfp104 | hOAZ | zinc finger protein 423 | 16q12 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation GSMA_IIE |
|
| 83752 | LONP2 | LONP | LONPL | lon peptidase 2, peroxisomal | 16q12.1 | DMG:Wockner_2014 GO_Annotation GSMA_IIE |
|
| 55066 | PDPR | PDP3 | pyruvate dehydrogenase phosphatase regulatory subunit | 16q22.1 | CV:PGCnp | |
| 51741 | WWOX | D16S432E | EIEE28 | FOR | FRA16D | HHCMA56 | PRO0128 | SCAR12 | SDR41C1 | WOX1 | WW domain containing oxidoreductase | 16q23 | CV:GWAScat CV:GWASdb CV:PGCnp DMG:Wockner_2014 |
|
| 79726 | WDR59 | FP977 | WD repeat domain 59 | 16q23.1 | CV:GWASdb CV:PGCnp |
|
| 54550 | NECAB2 | EFCBP2 | N-terminal EF-hand calcium binding protein 2 | 16q23.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 5176 | SERPINF1 | EPC-1 | OI12 | OI6 | PEDF | PIG35 | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 | 17p13.3 | CV:PGCnp GO_Annotation |
|
| 6752 | SSTR2 | - | somatostatin receptor 2 | 17q24 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
|
| 7050 | TGIF1 | HPE4 | TGIF | TGFB induced factor homeobox 1 | 18p11.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 79822 | ARHGAP28 | - | Rho GTPase activating protein 28 | 18p11.31 | CV:PGCnp | |
| 494470 | RNF165 | ARKL2 | RNF111L2 | ring finger protein 165 | 18q21.1 | CV:PGCnp DMG:Wockner_2014 |
|
| 3953 | LEPR | CD295 | LEP-R | LEPRD | OB-R | OBR | leptin receptor | 1p31 | CV:PGCnp GSMA_IIA PMID:cooccur |
|
| 26289 | AK5 | AK6 | adenylate kinase 5 | 1p31 | CV:PGCnp DMG:Wockner_2014 GSMA_IIA |
CompositeSet |
| 399474 | TMEM200B | TTMB | transmembrane protein 200B | 1p35 | CV:PGCnp | |
| 4237 | MFAP2 | MAGP | MAGP-1 | MAGP1 | microfibrillar associated protein 2 | 1p36.1-p35 | CV:PGCnp | |
| 22874 | PLEKHA6 | PEPP-3 | PEPP3 | pleckstrin homology domain containing A6 | 1q32.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 DNM:Fromer_2014 PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet |
| 57144 | PAK7 | PAK5 | p21 protein (Cdc42/Rac)-activated kinase 7 | 20p12 | CV:PGCnp DMG:Wockner_2014 GSMA_I PMID:cooccur |
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS |
| 116154 | PHACTR3 | C20orf101 | H17739 | PPP1R123 | SCAPIN1 | SCAPININ | phosphatase and actin regulator 3 | 20q13.32-q13.33 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 |
|
| 9510 | ADAMTS1 | C3-C5 | METH1 | ADAM metallopeptidase with thrombospondin type 1 motif 1 | 21q21.2 | CV:PGCnp DMG:Wockner_2014 DNM:Fromer_2014 |
CompositeSet Ascano FMRP targets |
| 11096 | ADAMTS5 | ADAM-TS 11 | ADAM-TS 5 | ADAM-TS5 | ADAMTS-11 | ADAMTS-5 | ADAMTS11 | ADMP-2 | ADAM metallopeptidase with thrombospondin type 1 motif 5 | 21q21.3 | CV:PGCnp DMG:Jaffe_2016 |
|
| 440823 | MIAT | C22orf35 | GOMAFU | LINC00066 | NCRNA00066 | RNCR2 | lncRNA-MIAT | myocardial infarction associated transcript (non-protein coding) | 22q12.1 | CV:PGCnp PMID:cooccur |
|
| 388969 | C2orf68 | HCRCN81 | chromosome 2 open reading frame 68 | 2p11.2 | CV:PGCnp DEG:Zhao_2015 |
|
| 53335 | BCL11A | BCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856 | B-cell CLL/lymphoma 11A | 2p16.1 | CV:GWASdb CV:PGCnp PMID:cooccur |
|
| 84620 | ST6GAL2 | SIAT2 | ST6GalII | ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 | 2q12.3 | CV:PGCnp GSMA_I GSMA_IIA PMID:cooccur |
|
| 1281 | COL3A1 | EDS4A | collagen type III alpha 1 | 2q31 | CV:PGCnp DNM:Xu_2012 |
CompositeSet |
| 2335 | FN1 | CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSF | fibronectin 1 | 2q34 | CV:PGCnp DNM:Fromer_2014 DNM:Guipponi_2014 GR_Ng GSMA_IIA GSMA_IIE PMID:cooccur |
CompositeSet |
| 151473 | SLC16A14 | MCT14 | solute carrier family 16 member 14 | 2q36.3 | CV:PGCnp DMG:Wockner_2014 |
|
| 6092 | ROBO2 | SAX3 | roundabout guidance receptor 2 | 3p12.3 | CV:GWASdb CV:PGCnp GO_Annotation GSMA_IIA GSMA_IIE PMID:cooccur |
CELL ADHESION AND TRANSSYNAPTIC SIGNALING |
| 7474 | WNT5A | hWNT5A | wingless-type MMTV integration site family member 5A | 3p21-p14 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation PMID:cooccur |
|
| 6304 | SATB1 | - | SATB homeobox 1 | 3p23 | CV:PGCnp DMG:Montano_2016 GSMA_I PMID:cooccur |
Chromatin Remodeling Genes |
| 2917 | GRM7 | GLUR7 | GPRC1G | MGLU7 | MGLUR7 | PPP1R87 | glutamate receptor, metabotropic 7 | 3p26.1-p25.1 | Association CV:GWASdb CV:PGCnp DMG:Wockner_2014 GO_Annotation GR_WM Network PMID:cooccur |
GPCR SIGNALLING G2Cdb.humanPSD G2Cdb.humanPSP Potential synaptic genes |
| 57633 | LRRN1 | FIGLER3 | NLRR-1 | leucine rich repeat neuronal 1 | 3p26.2 | CV:PGCnp DMG:Jaffe_2016 |
|
| 91653 | BOC | CDON2 | BOC cell adhesion associated, oncogene regulated | 3q13.2 | CV:PGCnp GSMA_IIA GSMA_IIE PMID:cooccur |
|
| 1356 | CP | CP-2 | 血浆铜蓝蛋白(铁氧化酶) | 3q23-q25 | CV:PGCnp PMID:cooccur |
|
| 5156 | PDGFRA | CD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRA | platelet derived growth factor receptor alpha | 4q12 | CV:GWASdb CV:PGCnp CV:PheWAS DMG:Jaffe_2016 |
|
| 64116 | SLC39A8 | BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8 | solute carrier family 39 member 8 | 4q24 | CV:GWAScat CV:PGC128 CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
|
| 54510 | PCDH18 | PCDH68L | protocadherin 18 | 4q31 | CV:PGCnp Expression GO_Annotation PMID:cooccur |
|
| 730 | C7 | - | complement component 7 | 5p13 | CV:PGCnp PMID:cooccur |
|
| 167410 | LIX1 | C5orf11 | Lft | limb and CNS expressed 1 | 5q15 | CV:PGCnp DMG:Wockner_2014 |
|
| 10590 | SCGN | CALBL | DJ501N12.8 | SECRET | SEGN | setagin | secretagogin, EF-hand calcium binding protein | 6p22.3-p22.1 | CV:GWASdb CV:PGCnp GSMA_I |
|
| 9892 | SNAP91 | AP180 | CALM | synaptosome associated protein 91kDa | 6q14.2 | CV:PGC128 CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur |
ENDOCYTOSIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_clathrin G2Cdb.human_Synaptosome CompositeSet Darnell FMRP targets |
| 2309 | FOXO3 | AF6q21 | FKHRL1 | FKHRL1P2 | FOXO2 | FOXO3A | forkhead box O3 | 6q21 | CV:PGCnp DMG:Wockner_2014 Network |
CompositeSet Darnell FMRP targets |
| 107 | ADCY1 | AC1 | DFNB44 | adenylate cyclase 1 (brain) | 7p12.3 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
CANABINOID DOPAMINE INTRACELLULAR SIGNAL TRANSDUCTION SEROTONIN CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 273 | AMPH | AMPH1 | amphiphysin | 7p14-p13 | CV:PGCnp GO_Annotation Network PMID:cooccur |
EXOCYTOSIS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS G2Cdb.human_clathrin G2Cdb.human_Synaptosome CompositeSet Darnell FMRP targets |
| 9734 | HDAC9 | HD7 | HD7b | HD9 | HDAC | HDAC7 | HDAC7B | HDAC9B | HDAC9FL | HDRP | MITR | histone deacetylase 9 | 7p21.1 | CV:GWASdb CV:PGCnp DMG:Wockner_2014 PMID:cooccur |
Chromatin Remodeling Genes |
| 84629 | TNRC18 | CAGL79 | TNRC18A | trinucleotide repeat containing 18 | 7p22.1 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 DNM:Fromer_2014 |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 5166 | PDK4 | - | pyruvate dehydrogenase kinase 4 | 7q21.3 | CV:PGCnp DEG:Zhao_2015 DMG:Wockner_2014 Expression |
|
| 1750 | DLX6 | - | distal-less homeobox 6 | 7q22 | DMG:Wockner_2014 GO_Annotation PMID:cooccur |
|
| 1523 | CUX1 | CASP | CDP | CDP/Cut | CDP1 | COY1 | CUTL1 | CUX | Clox | Cux/CDP | GOLIM6 | Nbla10317 | p100 | p110 | p200 | p75 | cut like homeobox 1 | 7q22.1 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 |
CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 26136 | TES | TESS | TESS-2 | testin LIM domain protein | 7q31.2 | CV:PGCnp PMID:cooccur |
|
| 10157 | AASS | LKR/SDH | LKRSDH | LORSDH | aminoadipate-semialdehyde synthase | 7q31.3 | CV:PGCnp Expression GO_Annotation PMID:cooccur |
|
| 55893 | ZNF395 | HDBP-2 | HDBP2 | HDRF-2 | PBF | PRF-1 | PRF1 | Si-1-8-14 | zinc finger protein 395 | 8 p21.1 | CV:PGCnp DEG:Maycox_2009 DMG:Wockner_2014 Expression GSMA_IIA GSMA_IIE |
Ascano FMRP targets |
| 2675 | GFRA2 | GDNFRB | NRTNR-ALPHA | NTNRA | RETL2 | TRNR2 | GDNF family receptor alpha 2 | 8 p21.3 | CV:PGCnp GO_Annotation GSMA_I GSMA_IIA GSMA_IIE PMID:cooccur |
|
| 4325 | MMP16 | C8orf57 | MMP-X2 | MT-MMP2 | MT-MMP3 | MT3-MMP | matrix metallopeptidase 16 | 8q21.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 LK:YES PMID:cooccur |
|
| 158326 | FREM1 | BNAR | C9orf143 | C9orf145 | C9orf154 | MOTA | TILRR | TRIGNO2 | FRAS1 related extracellular matrix 1 | 9p22.3 | CV:GWASdb CV:PGCnp |
|
| 56548 | CHST7 | C6ST-2 | GST-5 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 | Xp11.23 | CV:PGCnp PMID:cooccur |
|