Search results: The pahtwayp4407has 118 genes in the original annotation. Currently, there are 68 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
9044 BTAF1 MOT1 | TAF(II)170 | TAF172 | TAFII170 B-TFIID TATA-box binding protein associated factor 1 10q22-q23 CV:GWASdb
CV:PGCnp
340665 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 10q23.33 CV:PGCnp
GO_Annotation
PMID:cooccur
3983 ABLIM1 ABLIM | LIMAB1 | LIMATIN | abLIM-1 actin binding LIM protein 1 10q25 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
9573 GDF3 KFS3 | MCOP7 | MCOPCB6 growth differentiation factor 3 12p13.1 CV:PGCnp
PMID:cooccur
7450 VWF F8VWF | VWD von Willebrand factor 12p13.3 CV:PGCnp
Expression
PMID:cooccur
57494 RIMKLB FAM80B | NAAGS | NAAGS-I ribosomal modification protein rimK-like family member B 12p13.31 CV:GWASdb
CV:PGCnp
3887 KRT81 HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1 keratin 81 12q13 CV:PGCnp
7637 ZNF84 HPF2 zinc finger protein 84 12q24.33 DMG:Jaffe_2016
79758 DHRS12 SDR40C1 特别提款权脱氢酶/还原酶(家庭)成员12 13q14.3 DMG:Wockner_2014
85446 ZFHX2 ZFH-5 | ZNF409 zinc finger homeobox 2 14q11.2 CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
1690 COCH COCH-5B2 | COCH5B2 | DFNA9 cochlin 14q11.2-q13 CV:PGCnp
DEG:Sanders_2013
GSMA_I
6547 SLC8A3 NCX3 solute carrier family 8 member A3 14q24.1 CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
6447 SCG5 7B2 | P7B2 | SGNE1 | SgV secretogranin V 15q13-q14 CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
54852 PAQR5 MPRG progestin and adipoQ receptor family member V 15q23 CV:GWAScat
CV:GWASdb
CV:PGCnp
10933 MORF4L1 Eaf3 | FWP006 | HsT17725 | MEAF3 | MORFRG15 | MRG15 | S863-6 mortality factor 4 like 1 15q24 CV:PGCnp
DMG:Wockner_2014
7041 TGFB1I1 ARA55 | HIC-5 | HIC5 | TSC-5 transforming growth factor beta 1 induced transcript 1 16p11.2 CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
4502 MT2A MT2 metallothionein 2A 16q13 CV:PGCnp
PMID:cooccur
116840 CNTROB LIP8 | PP1221 centrobin, centrosomal BRCA2 interacting protein 17p13.1 CV:PGCnp
9196 KCNAB3 AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3 potassium voltage-gated channel subfamily A regulatory beta subunit 3 17p13.1 CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
58485 TRAPPC1 BET5 | MUM2 trafficking protein particle complex 1 17p13.1 CV:PGCnp
201176 ARHGAP27 CAMGAP1 | PP905 | SH3D20 | SH3P20 Rho GTPase activating protein 27 17q21.31 CV:PGCnp
26115 TANC2 ROLSA | rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 17q23.3 CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29115 SAP30BP HCNGP | HTRG | HTRP SAP30 binding protein 17q25.1 CV:PGCnp
DNM:Xu_2012
CompositeSet
124583 CANT1 DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPY calcium activated nucleotidase 1 17q25.3 CV:PGCnp
84617 TUBB6 HsT1601 | TUBB-5 tubulin beta 6 class V 18p11.21 CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
114876 OSBPL1A ORP-1 | ORP1 | OSBPL1B oxysterol binding protein like 1A 18q11.1 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9063 PIAS2 ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4 protein inhibitor of activated STAT 2 18q21.1 CV:PGCnp
PMID:cooccur
5366 PMAIP1 APR | NOXA phorbol-12-myristate-13-acetate-induced protein 1 18q21.32 CV:PGCnp
DMG:Jaffe_2016
56848 SPHK2 SK 2 | SK-2 | SPK 2 | SPK-2 sphingosine kinase 2 19q13.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6625 SNRNP70 RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNP small nuclear ribonucleoprotein U1 subunit 70 19q13.3 CV:PGCnp
63934 ZNF667 MIPU1 zinc finger protein 667 19q13.43 CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
147948 ZNF582 - zinc finger protein 582 19q13.43 CV:PGCnp
10236 HNRNPR HNRPR | hnRNP-R heterogeneous nuclear ribonucleoprotein R 1p36.12 CV:PGCnp
DMG:Jaffe_2016
51686 OAZ3 AZ3 | OAZ-t | TISP15 ornithine decarboxylase antizyme 3 1q21.3 DMG:Wockner_2014
GSMA_I
GSMA_IIA
23248 RPRD2 HSPC099 | KIAA0460 regulation of nuclear pre-mRNA domain containing 2 1q21.3 CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9019 MPZL1 MPZL1b | PZR | PZR1b | PZRa | PZRb myelin protein zero like 1 1q24.2 Association
CV:PGCnp
PMID:cooccur
26052 DNM3 Dyna III dynamin 3 1q24.3 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10765 KDM5B CT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1 lysine demethylase 5B 1q32.1 CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
3172 HNF4A FRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14 hepatocyte nuclear factor 4 alpha 20q13.12 CV:PGCnp
GO_Annotation
PMID:cooccur
55861 DBNDD2 C20orf35 | CK1BP | HSMNP1 dysbindin (dystrobrevin binding protein 1) domain containing 2 20q13.12 DEG:Sanders_2013
3455 IFNAR2 IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45 interferon alpha and beta receptor subunit 2 21q22.11 CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
114800 CCDC85A - coiled-coil domain containing 85A 2p16.1 CV:PGCnp
3685 ITGAV CD51 | MSK8 | VNRA | VTNR integrin subunit alpha V 2q31-q32 CV:PGCnp
DMG:Wockner_2014
8828 NRP2 NP2 | NPN2 | PRO2714 | VEGF165R2 neuropilin 2 2q33.3 CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
51143 DYNC1LI1 DNCLI1 | LIC1 dynein cytoplasmic 1 light intermediate chain 1 3p22.3 CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
7068 THRB C-ERBA-2 | C-ERBA-BETA | ERBA2 | GRTH | NR1A2 | PRTH | THR1 | THRB1 | THRB2 甲状腺激素受体beta 3p24.2 CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
2815 GP9 CD42a | GPIX glycoprotein IX platelet 3q21.3 CV:PGCnp
DMG:Wockner_2014
5217 PFN2 D3S1319E | PFL profilin 2 3q25.1 Network STRUCTURAL PLASTICITY
CompositeSet
131408 FAM131A C3orf40 | FLAT715 | PRO1378 family with sequence similarity 131 member A 3q27.1 DMG:Wockner_2014
80235 PIGZ GPI-MT-IV | PIG-Z | SMP3 phosphatidylinositol glycan anchor biosynthesis class Z 3q29 CNV:YES
CV:PGCnp
DMG:Wockner_2014
2983 GUCY1B3 GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1 guanylate cyclase 1, soluble, beta 3 4q31.3-q33 CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
7097 TLR2 CD282 | TIL4 toll like receptor 2 4q32 CV:PGCnp
PMID:cooccur
51663 ZFR SPG71 | ZFR1 zinc finger RNA binding protein 5p13.3 CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
1393 CRHBP CRF-BP | CRFBP corticotropin releasing hormone binding protein 5q13.3 CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
4762 NEUROG1 AKA | Math4C | NEUROD3 | bHLHa6 | ngn1 neurogenin 1 5q23-q31 Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
5515 PPP2CA PP2Ac | PP2CA | PP2Calpha | RP-C protein phosphatase 2 catalytic subunit alpha 5q31.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
81578 COL21A1 COLA1L | FP633 collagen type XXI alpha 1 6p12.3-p11.2|6p12.3-p11.2 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
23113 CUL9 H7AP1 | PARC cullin 9 6p21.1 CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
285800 PRR18 - proline rich 18 6q27 CV:PGCnp
DEG:Zhao_2015
8379 MAD1L1 MAD1 | PIG9 | TP53I9 | TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) 7p22 CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
23534 TNPO3 IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSR transportin 3 7q32.1 CV:PGCnp Ascano FMRP targets
835 CASP2 CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57 caspase 2 7q34-q35 CV:PGCnp
23516 SLC39A14 LZT-Hs4 | NET34 | ZIP14 | cig19 solute carrier family 39 member 14 8p21.3 CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
4342 MOS MSV v-mos Moloney murine sarcoma viral oncogene homolog 8q11 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
92421 CHMP4C SNF7-3 | Shax3 | VPS32C charged multivesicular body protein 4C 8q21.13 CV:GWASdb
CV:PGCnp
51010 EXOSC3 CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10 exosome component 3 9p11 CV:PGCnp
PMID:cooccur
81689 ISCA1 HBLD2 | ISA1 | hIscA iron-sulfur cluster assembly 1 9q21.33 CV:PGCnp
6736 SRY SRXX1 | SRXY1 | TDF | TDY sex determining region Y Yp11.3 PMID:cooccur


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