Search results: The pahtwayp4545has 43 genes in the original annotation. Currently, there are 27 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
5800 PTPRO GLEPP1 | NPHS6 | PTP-OC | PTP-U2 | PTPROT | PTPU2 | R-PTP-O protein tyrosine phosphatase, receptor type O 12p13.3-p13.2|12p13-p12 CV:GWAScat
CV:PGCnp
PMID:cooccur
10186 LHFP - lipoma HMGIC fusion partner 13q12 CV:PGCnp
DMG:Nishioka_2013
10082 GPC6 OMIMD1 glypican 6 13q32 CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
81537 SGPP1 SPPase1 sphingosine-1-phosphate phosphatase 1 14q23.2 CV:PGCnp
PMID:cooccur
3091 HIF1A HIF-1-alpha | HIF-1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | bHLHe78 hypoxia inducible factor 1 alpha subunit 14q23.2 CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
6642 SNX1 HsT17379 | VPS5 sorting nexin 1 15q22.31 CV:PGCnp
1540 CYLD BRSS | CDMT | CYLD1 | CYLDI | EAC | MFT | MFT1 | SBS | TEM | USPL2 CYLD lysine 63 deubiquitinase 16q12.1 CV:PGCnp
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
10513 APPBP2 APP-BP2 | HS.84084 | PAT1 amyloid beta precursor protein binding protein 2 17q23.2 CV:PGCnp
DMG:Jaffe_2016
23253 ANKRD12 ANCO-2 | ANCO1 | GAC-1 | Nbla00144 ankyrin repeat domain 12 18p11.22 CV:GWASdb
CV:PGCnp
1994 ELAVL1 ELAV1 | HUR | Hua | MelG ELAV like RNA binding protein 1 19p13.2 CV:PGCnp
998 CDC42 CDC42Hs | G25K | TKS cell division cycle 42 1p36.1 CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
8672 EIF4G3 eIF-4G 3 | eIF4G 3 | eIF4GII eukaryotic translation initiation factor 4 gamma 3 1p36.12 CV:GWAScat
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
10092 ARPC5 ARC16 | dJ127C7.3 | p16-Arc actin related protein 2/3 complex subunit 5 1q25.3 CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
STRUCTURAL PLASTICITY
23054 NCOA6 AIB3 | ASC2 | NRC | PRIP | RAP250 | TRBP nuclear receptor coactivator 6 20q11 CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
23760 PITPNB PI-TP-beta | PtdInsTP | VIB1B phosphatidylinositol transfer protein beta 22q12.1 CV:PGCnp
Expression
GSMA_I
4627 MYH9 BDPLT6 | DFNA17 | EPSTS | FTNS | MHA | NMHC-II-A | NMMHC-IIA | NMMHCA myosin, heavy chain 9, non-muscle 22q13.1 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Ascano FMRP targets
114793 FMNL2 FHOD2 formin like 2 2q23.3 CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
CompositeSet
6533 SLC6A6 TAUT solute carrier family 6 member 6 3p25.1 CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GSMA_I
CELL METABOLISM
3516 RBPJ AOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | csl recombination signal binding protein for immunoglobulin kappa J region 4p15.2 CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5515 PPP2CA PP2Ac | PP2CA | PP2Calpha | RP-C protein phosphatase 2 catalytic subunit alpha 5q31.1 CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
7975 MAFK NFE2U | P18 v-maf禽流感肌肉筋膜纤维arcoma oncogene homolog K 7p22.3 CV:PGCnp
DMG:Wockner_2014
10142 AKAP9 AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAO A-kinase anchoring protein 9 7q21-q22 CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10049 DNAJB6 DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 7q36.3 CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
64641 EBF2 COE2 | EBF-2 | O/E-3 | OE-3 early B-cell factor 2 8p21.2 CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
10397 NDRG1 CAP43 | CMT4D | DRG-1 | DRG1 | GC4 | HMSNL | NDR1 | NMSL | PROXY1 | RIT42 | RTP | TARG1 | TDD5 N-myc downstream regulated 1 8q24.3 CV:PGCnp
DEG:Zhao_2015
Network
5789 PTPRD HPTP | HPTPD | HPTPDELTA | PTPD | RPTPDELTA protein tyrosine phosphatase, receptor type D 9p23-p24.3 CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1654 DDX3X CAP-Rf | DBX | DDX14 | DDX3 | HLP2 | MRX102 DEAD-box helicase 3, X-linked Xp11.3-p11.23 CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes


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