Search results: The pahtwayp4565has 58 genes in the original annotation. Currently, there are 35 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group? Functional group?
80312 TET1 CXXC6 | LCX | MLL-TET1 | TET1-MLL | bA119F7.1 tet methylcytosine dioxygenase 1 10q21 CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
4838 NODAL HTX5 nodal growth differentiation factor 10q22.1 CV:PGCnp
PMID:cooccur
390110 ACCSL - 1-aminocyclopropane-1-carboxylate synthase (inactive)-like 11p11.2 CV:PGCnp
DNM:Fromer_2014
CompositeSet
796 CALCA CALC1 | CGRP | CGRP-I | CGRP1 | CT | KC | PCT calcitonin related polypeptide alpha 11p15.2 CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
84153 RNASEH2C AGS3 | AYP1 ribonuclease H2 subunit C 11q13.1 CV:PGCnp
1656 DDX6 HLR2 | P54 | RCK DEAD-box helicase 6 11q23.3 CV:PGCnp
CV:PheWAS
GSMA_I
23710 GABARAPL1 APG8-LIKE | APG8L | ATG8 | ATG8B | ATG8L | GEC1 GABA(A) receptor-associated protein like 1 12p13.2 CV:GWASdb
CV:PGCnp
GO_Annotation
1045 CDX2 CDX-3 | CDX2/AS | CDX3 caudal type homeobox 2 13q12.3 DMG:Wockner_2014
23091 ZC3H13 KIAA0853 zinc finger CCCH-type containing 13 13q14.13 CV:PGCnp
PMID:cooccur
9455 HOMER2 ACPD | CPD | DFNA68 | HOMER-2 | VESL-2 homer scaffolding protein 2 15q24.3 CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
4313 MMP2 CLG4 | CLG4A | MMP-2 | MMP-II | MONA | TBE-1 matrix metallopeptidase 2 16q12.2 CV:PGCnp
Network
PMID:cooccur
9244 CRLF1 CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5 cytokine receptor-like factor 1 19p12 CV:PGCnp
DMG:Wockner_2014
342977 NANOS3 NANOS1L | NOS3 nanos homolog 3 (Drosophila) 19p13.13 DMG:Wockner_2014
55621 TRMT1 TRM1 tRNA methyltransferase 1 19p13.2 CV:PGCnp
4125 MAN2B1 LAMAN | MANB mannosidase alpha class 2B member 1 19p13.2 CV:PGCnp
DMG:Montano_2016
79830 ZMYM1 MYM zinc finger MYM-type containing 1 1p34.3 CV:PGCnp
DMG:vanEijk_2014
10637 LEFTY1 LEFTB | LEFTYB left-right determination factor 1 1q42.1 CV:PGCnp
DMG:Jaffe_2016
84886 C1orf198 - chromosome 1 open reading frame 198 1q42.2 CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2953 GSTT2 - glutathione S-transferase theta 2 (gene/pseudogene) 22q11.23 CV:PGCnp
Expression
GSMA_I
PMID:cooccur
79019 CENPM C22orf18 | CENP-M | PANE1 centromere protein M 22q13.2 CV:PGC128
CV:PGCnp
54884 RETSAT - retinol saturase (all-trans-retinol 13,14-reductase) 2p11.2 CV:PGCnp
GSMA_I
905 CCNT2 CYCT2 细胞周期蛋白T2 2q21.3 CV:PGCnp
GSMA_I
GSMA_IIA
1803 DPP4 ADABP | ADCP2 | CD26 | DPPIV | TP103 dipeptidyl peptidase 4 2q24.3 CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
389058 SP5 - Sp5 transcription factor 2 q31.1 CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5163 PDK1 - pyruvate dehydrogenase kinase 1 2 q31.1 CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9497 SLC4A7 NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6 solute carrier family 4 member 7 3p22 CV:PGCnp
GO_Annotation
GSMA_I
10402 ST3GAL6 SIAT10 | ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 q12.1 CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_IIA
GSMA_IIE
7200 TRH Pro-TRH | TRF thyrotropin releasing hormone 3q13.3-q21 CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
10468 FST FS follistatin 5 q11.2 CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
170680 PSORS1C2 C6orf17 | SPR1 psoriasis susceptibility 1 candidate 2 6p21.3 CV:GWASdb
CV:PGCnp
GSMA_I
4855 NOTCH4 INT3 notch 4 6p21.3 Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
4907 NT5E CALJA | CD73 | E5NT | NT | NT5 | NTE | eN | eNT 5'-nucleotidase ecto 6q14-q21 CV:GWASdb
CV:PGCnp
10124 ARL4A ARL4 ADP ribosylation factor like GTPase 4A 7p21.3 CV:PGCnp
51085 MLXIPL CHREBP | MIO | MONDOB | WBSCR14 | WS-bHLH | bHLHd14 MLX interacting protein like 7q11.23 CNV:YES
CV:PGCnp
2770 GNAI1 Gi G protein subunit alpha i1 7q21 CV:PGCnp
Network
PMID:cooccur
CANABINOID
G-PROTEIN RELAY
SEROTONIN
Potential synaptic genes


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